🌾 PASTIS 🌾 Panoptic Agricultural Satellite TIme Series

Overview

🌾 PASTIS 🌾 Panoptic Agricultural Satellite TIme Series (optical and radar)

The PASTIS Dataset

  • Dataset presentation

PASTIS is a benchmark dataset for panoptic and semantic segmentation of agricultural parcels from satellite time series. It contains 2,433 patches within the French metropolitan territory with panoptic annotations (instance index + semantic labelfor each pixel). Each patch is a Sentinel-2 multispectral image time series of variable lentgh.

We propose an official 5 fold split provided in the dataset's metadata, and evaluated several of the top-performing image time series networks. You are welcome to use our numbers and to submit your own entries to the leaderboard!

  • Dataset in numbers
▶️ 2,433 time series ▶️ 124,422 individual parcels ▶️ 18 crop types
▶️ 128x128 pixels / images ▶️ 38-61 acquisitions / series ▶️ 10m / pixel
▶️ 10 spectral bands ▶️ covers ~4,000 km² ▶️ over 2B pixels
  • 🔥 NEW: Radar extension (PASTIS-R)

We also propose an extended version of PASTIS which contains all radar observations of Sentinel-1 for all 2433 patches in addition to the Sentinel-2 images. For each patch, approximately 70 observations of Sentinel-1 in ascending orbit, and 70 observations in descending orbit are added to the dataset. The PASTIS-R extension can thus be used to evaluate optical-radar fusion methods for parcel-based classification, semantic segmentation, and panoptic segmentation.
For more details on PASTIS-R, refer to our recent paper on multi-modal fusion with attention-based models (link coming soon).

Usage

  • Download

The dataset can be downloaded from zenodo in different formats:

  1. PASTIS (29 GB zipped) : The original PASTIS dataset for semantic and panoptic segmentation on Sentinel-2 time series (format used for the ICCV 2021 paper). DOI
  2. PASTIS-R (54 GB zipped) : The extended version with Sentinel-1 observations. DOI
  3. PASTIS-R (pixel-set format) (27 GB zipped) : The PASTIS-R dataset prepared in pixel-set format for parcel-based classification only. See this repo and paper for more details on this format. DOI
  • Data loading

This repository also contains a PyTorch dataset class in code/dataloader.py that can be readily used to load data for training models on PASTIS and PASTIS-R. For the pixel-set dataset, use the dataloader in code/dataloader_pixelset.py. The time series contained in PASTIS have variable lengths. The code/collate.py contains a pad_collate function that you can use in the pytorch dataloader to temporally pad shorter sequences. The demo.ipynb notebook shows how to use these classes and methods to load data from PASTIS.

  • Metrics

A PyTorch implementation is also given in code/panoptic_metrics.py to compute the panoptic metrics. In order to use these metrics, the model's output should contain an instance prediction and a semantic prediction. The first one allocates an instance id to each pixel of the image, and the latter a semantic label.

Leaderboard

Please open an issue to submit new entries. Do mention if the work has been published and wether the code accessible for reproducibility. We require that at least a preprint is available to present the method used.

Semantic Segmentation

Optical only (PASTIS)

Model name #Params OA mIoU Published
U-TAE 1.1M 83.2% 63.1% ✔️ link
Unet-3d* 1.6M 81.3% 58.4% ✔️ link
Unet-ConvLSTM* 1.5M 82.1% 57.8% ✔️ link
FPN-ConvLSTM* 1.3M 81.6% 57.1% ✔️ link
Models that we re-implemented ourselves are denoted with a star (*).

Optical+Radar fusion (PASTIS-R)

Model name #Params OA mIoU Published
Late Fusion (U-TAE) + Aux + TempDrop 1.7M 84.2% 66.3% ✔️ link
Early Fusion (U-TAE) + TempDrop 1.6M 83.8% 65.9% ✔️ link

Panoptic Segmentation

Optical only (PASTIS)

Model name #Params SQ RQ PQ Published
U-TAE + PaPs 1.3M 81.3 49.2 40.4 ✔️ link

Optical+Radar fusion (PASTIS-R)

Model name #Params SQ RQ PQ Published
Early Fusion (U-TAE + PaPs) + Aux + TempDrop 1.8M 82.2 50.6 42.0 ✔️ link
Late Fusion (U-TAE + PaPs) + TempDrop 2.4M 81.6 50.5 41.6 ✔️ link

Documentation

The agricultural parcels are grouped into 18 different crop classes as shown in the table below. The backgroud class corresponds to non-agricultural land, and the void label for parcels that are mostly outside their patch. drawing

Additional information about the dataset can be found in the documentation/pastis-documentation.pdf document.

References

If you use PASTIS please cite the related paper:

@article{garnot2021panoptic,
  title={Panoptic Segmentation of Satellite Image Time Series
with Convolutional Temporal Attention Networks},
  author={Sainte Fare Garnot, Vivien  and Landrieu, Loic },
  journal={ICCV},
  year={2021}
}

For the PASTIS-R optical-radar fusion dataset, please also cite this paper:

@article{garnot2021mmfusion,
  title={Multi-Modal Temporal Attention Models for Crop Mapping from Satellite Time Series},
  author={Sainte Fare Garnot, Vivien  and Landrieu, Loic and Chehata, Nesrine },
  journal={arxiv},
  year={2021}
}

Credits

  • The satellite imagery used in PASTIS was retrieved from THEIA: "Value-added data processed by the CNES for the Theia www.theia.land.fr data cluster using Copernicus data. The treatments use algorithms developed by Theia’s Scientific Expertise Centres. "

  • The annotations used in PASTIS stem from the French land parcel identification system produced by IGN, the French mapping agency.

  • This work was partly supported by ASP, the French Payment Agency.

  • We also thank Zenodo for hosting the datasets.

External Attention Network

Beyond Self-attention: External Attention using Two Linear Layers for Visual Tasks paper : https://arxiv.org/abs/2105.02358 Jittor code will come soon

MenghaoGuo 357 Dec 11, 2022
Code for AA-RMVSNet: Adaptive Aggregation Recurrent Multi-view Stereo Network (ICCV 2021).

AA-RMVSNet Code for AA-RMVSNet: Adaptive Aggregation Recurrent Multi-view Stereo Network (ICCV 2021) in PyTorch. paper link: arXiv | CVF Change Log Ju

Qingtian Zhu 97 Dec 30, 2022
Additional code for Stable-baselines3 to load and upload models from the Hub.

Hugging Face x Stable-baselines3 A library to load and upload Stable-baselines3 models from the Hub. Installation With pip Examples [Todo: add colab t

Hugging Face 34 Dec 10, 2022
Pytorch code for our paper Beyond ImageNet Attack: Towards Crafting Adversarial Examples for Black-box Domains)

Beyond ImageNet Attack: Towards Crafting Adversarial Examples for Black-box Domains (ICLR'2022) This is the Pytorch code for our paper Beyond ImageNet

Alibaba-AAIG 37 Nov 23, 2022
Hyperparameters tuning and features selection are two common steps in every machine learning pipeline.

shap-hypetune A python package for simultaneous Hyperparameters Tuning and Features Selection for Gradient Boosting Models. Overview Hyperparameters t

Marco Cerliani 422 Jan 08, 2023
A PyTorch implementation of PointRend: Image Segmentation as Rendering

PointRend A PyTorch implementation of PointRend: Image Segmentation as Rendering [arxiv] [Official Implementation: Detectron2] This repo for Only Sema

AhnDW 336 Dec 26, 2022
Domain Adaptation with Invariant RepresentationLearning: What Transformations to Learn?

Domain Adaptation with Invariant RepresentationLearning: What Transformations to Learn? Repository Structure: DSAN |└───amazon |    └── dataset (Amazo

DMIRLAB 17 Jan 04, 2023
A 10000+ hours dataset for Chinese speech recognition

WenetSpeech Official website | Paper A 10000+ Hours Multi-domain Chinese Corpus for Speech Recognition Download Please visit the official website, rea

310 Jan 03, 2023
Source code and data in paper "MDFEND: Multi-domain Fake News Detection (CIKM'21)"

MDFEND: Multi-domain Fake News Detection This is an official implementation for MDFEND: Multi-domain Fake News Detection which has been accepted by CI

Rich 40 Dec 18, 2022
Deploy optimized transformer based models on Nvidia Triton server

Deploy optimized transformer based models on Nvidia Triton server

Lefebvre Sarrut Services 1.2k Jan 05, 2023
BTC-Generator - BTC Generator With Python

Что такое BTC-Generator? Это генератор чеков всеми любимого @BTC_BANKER_BOT Для

DoomGod 3 Aug 24, 2022
Angle data is a simple data type.

angledat Angle data is a simple data type. Installing + using Put angledat.py in the main dir of your project. Import it and use. Comments Comments st

1 Jan 05, 2022
Continuous Query Decomposition for Complex Query Answering in Incomplete Knowledge Graphs

Continuous Query Decomposition This repository contains the official implementation for our ICLR 2021 (Oral) paper, Complex Query Answering with Neura

UCL Natural Language Processing 71 Dec 29, 2022
Grounding Representation Similarity with Statistical Testing

Grounding Representation Similarity with Statistical Testing This repo contains code to replicate the results in our paper, which evaluates representa

26 Dec 02, 2022
Mortgage-loan-prediction - Show how to perform advanced Analytics and Machine Learning in Python using a full complement of PyData utilities

Mortgage-loan-prediction - Show how to perform advanced Analytics and Machine Learning in Python using a full complement of PyData utilities

Deepak Nandwani 1 Dec 31, 2021
Brax is a differentiable physics engine that simulates environments made up of rigid bodies, joints, and actuators

Brax is a differentiable physics engine that simulates environments made up of rigid bodies, joints, and actuators. It's also a suite of learning algorithms to train agents to operate in these enviro

Google 1.5k Jan 02, 2023
High-quality single file implementation of Deep Reinforcement Learning algorithms with research-friendly features

CleanRL (Clean Implementation of RL Algorithms) CleanRL is a Deep Reinforcement Learning library that provides high-quality single-file implementation

Costa Huang 1.8k Jan 01, 2023
PyTorch DepthNet Training on Still Box dataset

DepthNet training on Still Box Project page This code can replicate the results of our paper that was published in UAVg-17. If you use this repo in yo

Clément Pinard 115 Nov 21, 2022
The repository is for safe reinforcement learning baselines.

Safe-Reinforcement-Learning-Baseline The repository is for Safe Reinforcement Learning (RL) research, in which we investigate various safe RL baseline

172 Dec 19, 2022
Implementations of LSTM: A Search Space Odyssey variants and their training results on the PTB dataset.

An LSTM Odyssey Code for training variants of "LSTM: A Search Space Odyssey" on Fomoro. Check out the blog post. Training Install TensorFlow. Clone th

Fomoro AI 95 Apr 13, 2022